PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15557
Common NameKK1_016006
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ARR-B
Protein Properties Length: 257aa    MW: 28972.9 Da    PI: 5.3417
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15557genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.76e-24191240151
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                    +pr+ Wtp+LH+ Fv+av+q+ G +kA+Pk+ile+m+++gLt+e+++SHLQ
  C.cajan_15557 191 RPRVIWTPNLHRDFVKAVKQI-GDDKAVPKKILEVMNIPGLTRENIASHLQ 240
                    59*******************.9**************************** PP
2Response_reg59.61.7e-20171231109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    vl +d +p+v+e ++q++   +y ++  ++++  al+l++e+   +D+il+ + mp+mdG+e+l++ ++   ++p+iv++a ++++ + +a+  Ga
  C.cajan_15557  17 VLAIDTDPTVLEFIKQICVGLQY-QIIICTESLFALNLVRESSgsVDVILMELHMPDMDGHEFLQHVKK---DIPVIVMSADDAKSSIMKAVANGA 108
                    7899*******************.8888999999*****999999**********************99...78********************** PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                     d+  Kp ++++l +
  C.cajan_15557 109 CDYWIKPLQENQLKN 123
                    ***********9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.4E-2914144No hitNo description
SuperFamilySSF521722.13E-2714137IPR011006CheY-like superfamily
SMARTSM004481.8E-2015125IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011033.88116129IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.3E-1717123IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.86E-2018129No hitNo description
SuperFamilySSF466892.87E-15189244IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.4E-23190240IPR009057Homeodomain-like
TIGRFAMsTIGR015573.1E-22192244IPR006447Myb domain, plants
PfamPF002491.3E-5196240IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MAEIPSEASQ FSASLRVLAI DTDPTVLEFI KQICVGLQYQ IIICTESLFA LNLVRESSGS  60
VDVILMELHM PDMDGHEFLQ HVKKDIPVIV MSADDAKSSI MKAVANGACD YWIKPLQENQ  120
LKNIWTHAAR KVLTENNFGR LEDDDSRKRD KDNSEFGSST DNDVTGGVAS SSREPDEVDE  180
SDNSHQPPAK RPRVIWTPNL HRDFVKAVKQ IGDDKAVPKK ILEVMNIPGL TRENIASHLQ  240
VIFCFHVHLI FHNWTWL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A2e-16191240150Transcription factor LUX
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15557
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220449.11e-135two-component response regulator ORR21
TrEMBLA0A151T3910.0A0A151T391_CAJCA; Two-component response regulator ARR2
STRINGGLYMA08G05165.14e-87(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14524517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-59response regulator 2