PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15696
Common NameKK1_016158
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 248aa    MW: 26697.8 Da    PI: 4.8812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15696genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.5e-1854104155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  C.cajan_15696  54 PVYRGVRMRA-WGKWVSEIREPRK---KNRIWLGTFATAEMAARAHDVAALAIKG 104
                    68*****998.**********854...59**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.6E-1254104IPR001471AP2/ERF domain
PROSITE profilePS5103223.06455112IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-3255113IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-2155113IPR016177DNA-binding domain
SMARTSM003801.2E-3655118IPR001471AP2/ERF domain
PRINTSPR003672.5E-105667IPR001471AP2/ERF domain
CDDcd000183.77E-3256112No hitNo description
PRINTSPR003672.5E-107894IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
IVSVMAEPPS SEFEIISTAT TATTTRKHSS SEAQLAGPDH KKPKQAPDSS SKHPVYRGVR  60
MRAWGKWVSE IREPRKKNRI WLGTFATAEM AARAHDVAAL AIKGTSAILN FPQLAASLPR  120
PESNSPRDVQ AAAAKAAAME GVDGPRTPSL SQSSSSSSSS LAAVSEEAST ADELGEIVEL  180
PSLGTCFEIP DPGKEVVFLE PVDGWPYSQP WCDGIYDDRD CGDPISMHDS ESFILCGFEA  240
DFTSLWHH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1850113973Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15696
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221348.11e-180ethylene-responsive transcription factor TINY
SwissprotQ9LYD32e-56DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A151T3Q10.0A0A151T3Q1_CAJCA; Dehydration-responsive element-binding protein 3 (Fragment)
STRINGXP_007160302.11e-107(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-53ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Galuschka C,Schindler M,Bülow L,Hehl R
    AthaMap web tools for the analysis and identification of co-regulated genes.
    Nucleic Acids Res., 2007. 35(Database issue): p. D857-62
    [PMID:17148485]