PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16321
Common NameKK1_016798
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 470aa    MW: 53619.8 Da    PI: 8.4855
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16321genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.5e-12285329554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    h + ErrRR++iN+ f+ Lr llP+      +K +Ka+iL  A e ++sL
  C.cajan_16321 285 HMISERRRREKINENFQALRALLPPG-----TKKDKASILIAAKETLSSL 329
                    8899********************97.....8***********9998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-14280344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.03280329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.30E-10282333No hitNo description
Gene3DG3DSA:4.10.280.105.3E-14284344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-9285329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-10286335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MHPMESVFSL PVAARTDFIQ FLVQSFGCSY ICLWTCDSIN SPNRLCFLDG FYNVRNDQPS  60
STSGTVAQQL FSQFRTLTFD VNDDRVPGLA FRNQRPYLEL QQLELLRLAS TEIQTQFFQE  120
ARIKTAVFMG CNKGEIELGF LNMSQVDIQT ALRSLFPEDF SRQSQQIDQN NPPTSSSSSL  180
RSLSTGSPEY SSLLFKTEHD AIMRAILHVI SPTSHQHHQN LPYVVHPEAS AFQRYRPDIG  240
PNMASNFRRQ SLMKRSFAFF KNLNFMRMRE RIQATSRPTN TQLHHMISER RRREKINENF  300
QALRALLPPG TKKDKASILI AAKETLSSLV AEVDKLSKRN QGLTSLLPAK ESSTEETKVG  360
LSSNERVNVR LSHVPESSSS EERMVDLQVN VRGQISQIDL LIRILEFLKR SHHMSLVSMD  420
ANTHIAEGNN ALQQLTFRLR IIQGSEWDES AFEEAVRRVV ADLAQYQVDQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288293ERRRRE
2289294RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_16321
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-111AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221722.10.0putative transcription factor bHLH041 isoform X1
TrEMBLA0A151T5G60.0A0A151T5G6_CAJCA; Putative transcription factor bHLH041 family
STRINGGLYMA15G18580.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-69bHLH family protein