PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16964
Common NameKK1_017468
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 162aa    MW: 18490.3 Da    PI: 9.9631
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16964genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-121360655
                   HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
            HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                   + +Er+RR+++++ f +L +l+P++   +s+   s  + Le+A eYIk+Lq
  C.cajan_16964 13 KFIERNRRNQMKTLFRKLNSLVPHQ---RSREsISLPDQLEEAAEYIKKLQ 60
                   569*********************7...66666*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.592759IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-12876IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-6960No hitNo description
Gene3DG3DSA:4.10.280.101.5E-111173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00591365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-91460IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MENNPSPSKV DRKFIERNRR NQMKTLFRKL NSLVPHQRSR ESISLPDQLE EAAEYIKKLQ  60
INAEKLKDKK NMLLGNERSN GRMYGGKSVG LKSPRIEIQQ MGSALEVVLI TGLDSQFMFS  120
EIIRVLGEEE VDIVNASYKV IGDAVFHSIH CQVSHLTSIL HK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_16964
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221971.11e-108transcription factor bHLH162 isoform X1
RefseqXP_020221973.11e-108transcription factor bHLH162 isoform X2
SwissprotF4JIJ77e-42BH162_ARATH; Transcription factor bHLH162
TrEMBLA0A151T7701e-115A0A151T770_CAJCA; Transcription factor bHLH36
STRINGGLYMA13G31211.11e-87(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-44bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]