PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17074
Common NameKK1_017580
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 472aa    MW: 52508.8 Da    PI: 10.6103
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17074genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding248.9e-08740236
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRt 36
                     grW t+E++ll  av ++G+++W+ +a+++   Rt
    C.cajan_17074  7 GRWGTWEELLLGGAVLRHGTRDWNVVAAELR-ART 40
                     8*****************************9.665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF002491.5E-6757IPR001005SANT/Myb domain
SuperFamilySSF473701.96E-19258366IPR001487Bromodomain
Gene3DG3DSA:1.20.920.107.1E-17260368IPR001487Bromodomain
SMARTSM002976.9E-20263367IPR001487Bromodomain
CDDcd043699.71E-17264362No hitNo description
PfamPF004391.3E-11271351IPR001487Bromodomain
PROSITE profilePS5001410.18278348IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MGTEVMGRWG TWEELLLGGA VLRHGTRDWN VVAAELRART VSPYTITSEV CKAKYEDLQR  60
RYAGSKAWFE ELRKTRVAEL KRALELSEDS IGSLESKLES LKAGKNEKRD DCHVDKGSGH  120
PKLHVASQKL ERVESSTKET SKDGLSAGSF THETRTNWSP ECPLPAEDME AKPEVSHSTE  180
QDKVLSVDKL AHTIYEGHGG SFRKRRGKRK RKDCGRNMKE ASVGESDLLD SADVVSRCKE  240
SSTSNCGEVA KSCGADDQNR NLKKERVENI MEILDSVFET KGASAFRRRL DSQKRGRYKK  300
MIRQHMDFDT IRSRISSQTI KSSVELFRDL LLLTNNALVF YSKSTREYKS ALLLRDIVTK  360
KMKESLKGTS TKATIQATTN EPIKLPVQNP HVKPRSVRPG NRKIVAKAVG GNNSASGVSH  420
GTKKPSKVDS PSSVESLTVK KKGFGRPKKV GRGAAGQRPA IPTKGKKRVR TK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204212RRGKRKRKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17074
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150386e-70AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221280.10.0uncharacterized protein LOC109803972
TrEMBLA0A151T7J00.0A0A151T7J0_CAJCA; Uncharacterized protein
STRINGGLYMA15G07500.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF63041723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60110.15e-33DNA-binding bromodomain-containing protein