PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17200
Common NameKK1_017710
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 174aa    MW: 19554.7 Da    PI: 5.9302
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17200genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA41.32.1e-13127935
           GATA  9 TplWRrgpdgnktLCnaCGlyyrkkgl 35
                   TplWR+gp  ++tLCnaCG +y++kg+
  C.cajan_17200  1 TPLWRNGPAEKPTLCNACGSRYKLKGH 27
                   9************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577163.14E-7135No hitNo description
CDDcd002027.95E-12127No hitNo description
SMARTSM004010.0021139IPR000679Zinc finger, GATA-type
PfamPF003205.4E-11127IPR000679Zinc finger, GATA-type
PROSITE profilePS501149.104126IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.1E-9127IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
TPLWRNGPAE KPTLCNACGS RYKLKGHLDN YLPKNVQFQP LLKNLKNVHA DGSHVNVENE  60
LSNNVPPTDH DDENSNNSSP DFHHISVQDF GEKVPSRKRS PVEYRQMSPM EKFQKQLLRL  120
YECQRKSNES PPEESLLVDN VNNFIPSNEI GLGAMLLVTD AASAECSSID NQAQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17200
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221139.11e-126GATA transcription factor 26
TrEMBLA0A151T8091e-126A0A151T809_CAJCA; GATA transcription factor 28 (Fragment)
STRINGGLYMA08G19681.14e-63(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127471024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.13e-14GATA transcription factor 26