PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17340
Common NameKK1_017853
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 209aa    MW: 23108.2 Da    PI: 8.8479
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17340genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.4e-05181203223
                    EETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                    +Cp+C++ F+++ +L+ H  + H
  C.cajan_17340 181 VCPKCSRGFRDPVSLVEHVERdH 203
                    7*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1110.105.6E-1158114IPR000058Zinc finger, AN1-type
SuperFamilySSF1183103.34E-961110No hitNo description
PfamPF014281.2E-869108IPR000058Zinc finger, AN1-type
PROSITE profilePS501578.85180208IPR007087Zinc finger, C2H2
PROSITE patternPS000280182203IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
QVYCLEHRSY IKHQCTKADK RDVTVVICPL CAKGVRLVPD QDPNITWENH VNTECDPSNY  60
EKVTKKKKCP VPGCREILVF SNTIKCRDCT VDHCLKHRYG PDHKCPGPKN LQTSFSFMNI  120
LNGSKEGSKP KSSSSASSKW TTSFLNTASN IRASAEAGVS KLSGEVNQAW QTARGAVTID  180
VCPKCSRGFR DPVSLVEHVE RDHGGSSRA
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17340
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0984101e-161BT098410.1 Soybean clone JCVI-FLGm-16J1 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219148.11e-135zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 isoform X3
SwissprotQ9SCM47e-90SAP13_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13
TrEMBLA0A151T8F21e-154A0A151T8F2_CAJCA; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 (Fragment)
STRINGGLYMA02G31550.21e-126(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57480.13e-90C2H2 family protein
Publications ? help Back to Top
  1. Dixit A, et al.
    A stress-associated protein, AtSAP13, from Arabidopsis thaliana provides tolerance to multiple abiotic stresses.
    Plant Cell Environ., 2018. 41(5): p. 1171-1185
    [PMID:29194659]