PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17747
Common NameKK1_018270
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 267aa    MW: 30306.1 Da    PI: 7.5776
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17747genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ eEd+ l ++v+ +G g W ++a+  g++R++k+c+ rw++yl
    C.cajan_17747 13 KGAWSREEDQTLSKYVAIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYL 60
                     79********************************************97 PP
2Myb_DNA-binding45.51.8e-1466110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg  + +E++l+++++ +lG++ W++Ia++++ gRt++++k++w++ 
    C.cajan_17747  66 RGDISVDEEDLIIRLHPLLGNR-WALIAKRLP-GRTDNEIKNYWNTN 110
                      566789****************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129425.666864IPR017930Myb domain
SuperFamilySSF466891.72E-2911107IPR009057Homeodomain-like
SMARTSM007172.2E-151262IPR001005SANT/Myb domain
PfamPF002491.7E-161360IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.3E-231467IPR009057Homeodomain-like
CDDcd001673.97E-111560No hitNo description
PROSITE profilePS5129419.49465115IPR017930Myb domain
SMARTSM007173.2E-1465113IPR001005SANT/Myb domain
PfamPF002491.6E-1366111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.3E-2368115IPR009057Homeodomain-like
CDDcd001672.83E-1070111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MGRRPCCPKE INKGAWSREE DQTLSKYVAI HGEGKWQKVA QNAGLKRCGK SCRQRWLNYL  60
KPGIKRGDIS VDEEDLIIRL HPLLGNRWAL IAKRLPGRTD NEIKNYWNTN LSKKLQKQPT  120
SSYVSSLQRK HHEEETKQVH VAPEAPRPRR VKAVQHSKML DNGVCENCTP SNKVEGSSDE  180
ASFTDFLIDI DQSHLLNIGD DSNSKVLPQM EEEDHNNINN VGLTNSPSSS PPSDHCHHLL  240
PEKFDSLETL LDVELKRMAS FLGLEND
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C3e-271011524128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17747
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219338.10.0transcription factor MYB8
TrEMBLA0A151T9H60.0A0A151T9H6_CAJCA; Anthocyanin regulatory C1 protein
STRINGXP_007135451.11e-141(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF153551012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.12e-53MYB family protein