PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17749
Common NameKK1_018272
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 281aa    MW: 32259.3 Da    PI: 8.3611
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17749genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.54e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed++l ++++ +G g W+  +++ g++R++k+c++rw++yl
    C.cajan_17749 14 KGAWTALEDKILTEYINTHGEGKWRHLPKRAGLKRCGKSCRLRWLNYL 61
                     79********************************************97 PP
2Myb_DNA-binding51.42.5e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E+el+++++++lG++ W++Ia +++ gRt++++k++w++
    C.cajan_17749  67 RGNITNDEEELIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110
                      7999******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.513961IPR017930Myb domain
SuperFamilySSF466893.26E-2812108IPR009057Homeodomain-like
SMARTSM007177.3E-131363IPR001005SANT/Myb domain
PfamPF002495.7E-141461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-221568IPR009057Homeodomain-like
CDDcd001676.27E-91661No hitNo description
PROSITE profilePS5129423.89362116IPR017930Myb domain
SMARTSM007172.8E-1566114IPR001005SANT/Myb domain
PfamPF002491.5E-1467110IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.7E-2469116IPR009057Homeodomain-like
CDDcd001678.25E-1171112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MGRSPCCSKE GLNKGAWTAL EDKILTEYIN THGEGKWRHL PKRAGLKRCG KSCRLRWLNY  60
LRPGIKRGNI TNDEEELIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGRKLQNGV  120
ARSTLNTVQQ DRNLKNKEWH HYPNYSPDHK VSCLVQTKAT RWTKDITPQN EGIKNNVIGD  180
NKIVSPSSEN NKDPVLDFMA DLEMDGNFFS ELLKMDLPES SCHNENKIVE DNGNPSTVDK  240
RYLSPKSSSD TTQFPWGDSL YDTNFDFLPV TTFMESGFDW L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C1e-241211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17749
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219448.10.0transcription repressor MYB6
TrEMBLA0A151T9H80.0A0A151T9H8_CAJCA; Transcription factor MYB3
STRINGGLYMA16G00931.11e-160(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.15e-62myb domain protein 3