PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17973
Common NameKK1_018504
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WOX
Protein Properties Length: 315aa    MW: 34524.6 Da    PI: 5.9326
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17973genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.72.6e-152181257
                   T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
       Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                   r+R+t+++eq+ +Le+ F++   +p ++e  ++ k l     + +++V++WFqNrR + ++
  C.cajan_17973 21 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgTVGDANVFYWFQNRRSRSRR 81
                   89*****************99*************************************997 PP
2Wus_type_Homeobox106.91.3e-342083265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q
      C.cajan_17973 20 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQ 83
                       589***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-91590IPR009057Homeodomain-like
SuperFamilySSF466894.28E-141588IPR009057Homeodomain-like
PROSITE profilePS5007111.2721782IPR001356Homeobox domain
SMARTSM003891.8E-61986IPR001356Homeobox domain
PfamPF000464.9E-132181IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048830Biological Processadventitious root development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MEDHQGQHEA RQGPEKSEAV RSRWTPKPEQ ILILESIFNS GMVNPPKDET VRIRKLLEKF  60
GTVGDANVFY WFQNRRSRSR RRQRQMMQQA AAAVTTVVDQ PQPEPQLHAQ AQAQAQAQAQ  120
AQAQAQAQAE AEALIGGAIP HDHTQTQLNL VATQSASSTL GFGSSPSYDL LGSSSSQGIE  180
GFFSVSSPHM PFPDIIDHTS PASSLLYPPL DPNLSYQPGY GSTNISGFIT VFINGIATEL  240
PKGPIDFKSV FGNDVMLVHS SGIPVPINEF GFLMQSLQHG ESYFLVGTYS SIASIPNHES  300
HNYFLVFFNL PDSLI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17973
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150373e-77AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220126.11e-174WUSCHEL-related homeobox 11
TrEMBLA0A151TA490.0A0A151TA49_CAJCA; WUSCHEL-related homeobox 11
STRINGGLYMA19G29660.21e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58983152
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03660.18e-58WUSCHEL related homeobox 11