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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | C.cajan_18094 | ||||||||
| Common Name | KK1_018625 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family | bZIP | ||||||||
| Protein Properties | Length: 242aa MW: 27269.7 Da PI: 7.9803 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 50.5 | 4.6e-16 | 181 | 224 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
+r++r++kNRe+A rsR+RK+a+++eLe kv Le+eN++L+ +
C.cajan_18094 181 RRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQ 224
79***************************************965 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF81995 | 3.66E-6 | 94 | 136 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 1.6E-15 | 174 | 224 | No hit | No description |
| SMART | SM00338 | 3.3E-14 | 177 | 237 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 11.588 | 179 | 224 | IPR004827 | Basic-leucine zipper domain |
| CDD | cd14707 | 1.72E-23 | 181 | 227 | No hit | No description |
| SuperFamily | SSF57959 | 1.06E-12 | 181 | 230 | No hit | No description |
| Pfam | PF00170 | 2.1E-13 | 181 | 224 | IPR004827 | Basic-leucine zipper domain |
| PROSITE pattern | PS00036 | 0 | 184 | 199 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 242 aa Download sequence Send to blast |
MNLDELLKSV WSAESGTDAY MQHGQVASAG SSLTPQGSLT LCGDLSNKTI DEVWRDMQQK 60 KSTSKERQPT LGEMTLEDFL VKAGVATEPF TNEDRQQQQQ QQQQQQQQQQ HQQQNIVMPG 120 FSGFMAGHVV QQPIPVVVNP VLDAGYSEAM PSSLMGALSD SQTASRKRVA SGNVVEKTVE 180 RRQKRMIKNR ESAARSRARK QAYTQELEIK VSRLEEENER LRRQNVCFNS FVSLHHCFIL 240 VC |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. | |||||
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | C.cajan_18094 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | AP015037 | 3e-79 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. | |||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020218971.1 | 1e-134 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
| Refseq | XP_029127947.1 | 1e-134 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
| Swissprot | Q9LES3 | 2e-67 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
| TrEMBL | A0A151TAF6 | 1e-180 | A0A151TAF6_CAJCA; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
| STRING | GLYMA03G00580.1 | 1e-124 | (Glycine max) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF1320 | 34 | 105 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G56850.1 | 2e-59 | ABA-responsive element binding protein 3 | ||||
| Publications ? help Back to Top | |||
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