PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18164
Common NameKK1_018697
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 211aa    MW: 23358.6 Da    PI: 6.51
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18164genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00023960223
                   EETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                   +C+ C+k F+++  L  H++ H
  C.cajan_18164 39 SCKFCNKKFRNSQALGGHQNAH 60
                   7******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.8033865IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.609.3E-43964IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.43E-53965No hitNo description
PROSITE patternPS0002804060IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MSERVSIRDV ENKKLKRKIE EEPPTLAMED SNLFLNQLSC KFCNKKFRNS QALGGHQNAH  60
KRERLLLNIE KELEMKALEN VPLYSPPTYL PFQGTPLYHG ALMHPMKHMP NMSFTLAQPS  120
YDINQGFPLA PHFFGMTSTS GGGDATFPTI LNTEIEGYFY QIPSLVESAT TSLVGGSLSS  180
RVCVDGLTLQ GSPSVTTNDS SSSDLDLSLK L
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18164
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219683.11e-156zinc finger protein 7
TrEMBLA0A151TAM11e-154A0A151TAM1_CAJCA; Zinc finger protein 7
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF142291217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.13e-10C2H2 family protein