PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18198
Common NameKK1_018731
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 311aa    MW: 35064.5 Da    PI: 5.9143
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18198genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.7e-10137184355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    + h ++Er+RR+++  ++  L  ++P +     kK++Ka +L +A++Y k+Lq
  C.cajan_18198 137 QHHIIAERKRRQELTGSIIALSAIIPGL-----KKMDKAYVLGEAINYTKQLQ 184
                    6799************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.63134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-7137184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.37E-15137201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.91E-8137188No hitNo description
Gene3DG3DSA:4.10.280.102.4E-14138198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-10140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MEDSLENWIS QMDEVLNESD RAFDEEEFLR GILEHEREHP SNSSTNSSVS IEEATTSLRG  60
RSGTLKSNSS NSIKSFKTSC ATYLLSFDNS SAEPITHIEP SPKGLGLGCS NKRTAVKELE  120
EWKPQPKKKI RRSSDSQHHI IAERKRRQEL TGSIIALSAI IPGLKKMDKA YVLGEAINYT  180
KQLQERVKEL ENQNKDKRVD SATLVRKSQS NDNGETNTES LFEVEVRVLD EEVFIGIHCE  240
KQKDTVFKIH ALLGKLHLSV NTSSVLPFGS STLVINIIAQ MDEGYKMTMD ELVKKLREYL  300
LEVYDSNNGP C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126146KKKIRRSSDSQHHIIAERKRR
2142147ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18198
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218430.10.0transcription factor bHLH18
SwissprotQ9T0722e-44BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A151TAQ80.0A0A151TAQ8_CAJCA; Transcription factor bHLH25
STRINGGLYMA18G48126.11e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149471112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-46bHLH family protein