PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18602
Common NameKK1_019145
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 214aa    MW: 23874.3 Da    PI: 9.9017
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18602genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.4e-193176147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd +l ++v+++G+++W++I+r++  gR++k+c++rw + 
    C.cajan_18602 31 KGPWSAEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 76
                     79*****************************9.***********985 PP
2Myb_DNA-binding58.61.4e-1885127347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +++++Ed+ ++ a++q+G++ W+tIar ++ gRt++ +k++w++ 
    C.cajan_18602  85 PFSPQEDQTIIAAHAQYGNR-WATIARLLP-GRTDNAVKNHWNST 127
                      89******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.7782681IPR017930Myb domain
SuperFamilySSF466892.28E-3228124IPR009057Homeodomain-like
SMARTSM007177.2E-173079IPR001005SANT/Myb domain
PfamPF002496.8E-183176IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.7E-253284IPR009057Homeodomain-like
CDDcd001674.10E-163375No hitNo description
PROSITE profilePS5129421.98282132IPR017930Myb domain
SMARTSM007175.9E-1682130IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.6E-2485131IPR009057Homeodomain-like
PfamPF002491.7E-1585127IPR001005SANT/Myb domain
CDDcd001672.67E-1385128No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MNRSSSSTTS SSDSCSSDSN HRNTNNPDRI KGPWSAEEDR ILTRLVERYG PRNWSLISRY  60
IKGRSGKSCR LRWCNQLSPS VQHRPFSPQE DQTIIAAHAQ YGNRWATIAR LLPGRTDNAV  120
KNHWNSTLKR RANQGAASSS APSLHSHFQD DPLTALTLAP PGIASAAAPQ EPLPDHRPSP  180
ETAPPAFWDM MRDVIAREVR EYVSSNFSDN SAFH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A3e-43271333109B-MYB
1h88_C4e-432613253159MYB PROTO-ONCOGENE PROTEIN
1h89_C4e-432613253159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in auxin response. Functions in auxin signal transduction and modulates lateral root growth. Interacts with ARF response factors to promote auxin-responsive gene expression (PubMed:17675404). In response to auxin, binds sequence-specific motifs in the promoter of the auxin-responsive gene IAA19, and activates IAA19 transcription. The IAA19 transcription activation by MYB77 is enhanced by direct interaction between MYB77 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:17675404, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18602
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by auxin (PubMed:17675404). Down-regulated by potassium deprivation (PubMed:15173595). {ECO:0000269|PubMed:15173595, ECO:0000269|PubMed:17675404}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219044.11e-157transcription factor MYB77
SwissprotQ9SN125e-60MYB77_ARATH; Transcription factor MYB77
TrEMBLA0A151TBZ21e-156A0A151TBZ2_CAJCA; Transcription factor MYB44
STRINGGLYMA06G04010.11e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50743256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.19e-61myb domain protein 77
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]