PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18621
Common NameKK1_019164
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 210aa    MW: 22843.6 Da    PI: 9.6743
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18621genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1031.9e-32109162255
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    pr+rWt++LH++Fv+av++LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  C.cajan_18621 109 PRMRWTTTLHAHFVHAVQSLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 162
                    9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.36E-15106162IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-28107162IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23109162IPR006447Myb domain, plants
PfamPF002492.1E-7110161IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MPEPDLSLNI SPPFSSDSDA KQSCNGLTLT TKTLYNDISS SSTSDSGSTA GSDLSHENGV  60
PHRDKDTVYD LGHRVPTLSL GFETANLNPN HVQRNSRVVH GAKRSIRAPR MRWTTTLHAH  120
FVHAVQSLGG HERATPKSVL ELMNVKDLTL AHVKSHLQMY RTVKGSDKGS AGYGQTDIGL  180
SQKPGIVDLH GGLAFERANL PQPLLKSQRY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-18110164357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-18110164357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-18110164357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-18110164357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-18110164458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates carpel integuments formation. Required for the specification of polarity in the ovule inner integument. Modulates the content of flavonols and proanthocyanidin in seeds. {ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:19054366, ECO:0000269|PubMed:20444210}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18621
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219553.11e-153probable transcription factor KAN4
SwissprotQ9FJV52e-42KAN4_ARATH; Probable transcription factor KAN4
TrEMBLA0A151TC241e-153A0A151TC24_CAJCA; Putative Myb family transcription factor At1g14600 family
STRINGGLYMA06G03901.11e-100(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44633358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.25e-45G2-like family protein
Publications ? help Back to Top
  1. Lora J,Hormaza JI,Herrero M
    Transition from two to one integument in Prunus species: expression pattern of INNER NO OUTER (INO), ABERRANT TESTA SHAPE (ATS) and ETTIN (ETT).
    New Phytol., 2015. 208(2): p. 584-95
    [PMID:25991552]
  2. Skinner DJ,Brown RH,Kuzoff RK,Gasser CS
    Conservation of the role of INNER NO OUTER in development of unitegmic ovules of the Solanaceae despite a divergence in protein function.
    BMC Plant Biol., 2016. 16(1): p. 143
    [PMID:27350128]
  3. Gomez MD,Ventimilla D,Sacristan R,Perez-Amador MA
    Gibberellins Regulate Ovule Integument Development by Interfering with the Transcription Factor ATS.
    Plant Physiol., 2016. 172(4): p. 2403-2415
    [PMID:27794102]