PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18684
Common NameKK1_019228
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 576aa    MW: 64082.8 Da    PI: 5.9891
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18684genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox291.8e-093944311954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +e+  LA+++gLt +qV +WF N R +
  C.cajan_18684 394 FEHflHPYPKDSEKIMLARQTGLTRNQVANWFINARVR 431
                    665559******************************88 PP
2BELL126.41.1e-40265336172
           BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    erq+l  kk+kLls+l+eVdkrY+qy++q+q+v+ssF++vag+g+a+pYt+lAl++iSrhFrcL+dai++qi
  C.cajan_18684 265 ERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQI 336
                    6899999****************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.7E-62192334IPR006563POX domain
PfamPF075265.1E-49198333IPR006563POX domain
PROSITE profilePS5007112.438372435IPR001356Homeobox domain
CDDcd000867.73E-13375436No hitNo description
SMARTSM003891.6E-9375439IPR001356Homeobox domain
SuperFamilySSF466892.31E-17376442IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-28378441IPR009057Homeodomain-like
PfamPF059202.7E-17392431IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MYPNQAFSSG SYAEMMSGTS LLPHDYSESV GGQNEVKFIT AMGGTVTMQS INGHSNAATG  60
DPACNSYAGD SHVVSRTQMG IVDSEQNMQC HGLSLSLGTI MPSTSSVPPF QYQYHDTGLL  120
PLMTDFPNLK GTMSLKDDEA NNLHKELRSA ECMASVSSGG FHDMIKKEGF YNPHTSMCLK  180
EVPSDPCLQG SQGYSNSILN SQYLKEAQEL LDEIVSVRKA LKQPGMEKQE NCRDIGLDGS  240
KDSDGKSTGA NGSTANASIE LSPGERQNLL DKKTKLLSML DEVDKRYRQY CHQMQIVVSS  300
FDMVAGCGAA EPYTTLALRT ISRHFRCLRD AISGQIQVTQ RSLGEQEGIP RLRYVDQQLR  360
QQKALQQLGV MRQAWRPQRG LPESSVSILR AWLFEHFLHP YPKDSEKIML ARQTGLTRNQ  420
VANWFINARV RLWKPMVEEM YKEEFGESEM NCNLSSENTV KGKRDHVQEC DNNKWEESQD  480
NLVTNGGDGS LMGSTHATYD LSELGNFTVG GHVSLALELR NCESDGFAMS DDAIHKRRNQ  540
TLASSPEADL LDYHFTDSGK QQHRFGNPHL LHEFVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A8e-17381438158Homeobox protein Meis1
4xrs_B8e-17381438158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18684
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218841.10.0BEL1-like homeodomain protein 7
RefseqXP_020218842.10.0BEL1-like homeodomain protein 7
RefseqXP_020218843.10.0BEL1-like homeodomain protein 7
RefseqXP_029128055.10.0BEL1-like homeodomain protein 7
SwissprotQ9SIW11e-119BLH7_ARATH; BEL1-like homeodomain protein 7
TrEMBLA0A151TC660.0A0A151TC66_CAJCA; BEL1-like homeodomain protein 7
STRINGGLYMA04G03150.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21463179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-113BEL1-like homeodomain 7
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]