PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19318
Common NameKK1_019877
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NF-YC
Protein Properties Length: 150aa    MW: 16919.3 Da    PI: 9.9887
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19318genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC51.42.3e-167921397
          NF-YC 13 atdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                   ++     e+P  r+kki+  d+dvk++s+ea  l+s++ elf+  l+ +s   a e+kr+t++   i  av+r + + dfl+d+ p
  C.cajan_19318  7 NAASTVSEFPKGRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHIRVAVKRHQpTRDFLLDDLP 92
                   44445679***************************************************************9976489*****987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.102.2E-20978IPR009072Histone-fold
PfamPF008081.1E-191477IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
SuperFamilySSF471138.83E-201480IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MAEEEENAAS TVSEFPKGRV KKIMTLDKDV KRVSSEALFL VSRSTELFLQ FLAEKSAQVA  60
IEKKRKTVNL EHIRVAVKRH QPTRDFLLDD LPPPSQPNKP DKHTTPAARP KSDKPLPGTR  120
RIDQFFRKPE PENPAQAEAQ AQSPIPVDES
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19318
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234983.11e-104dr1-associated corepressor
TrEMBLA0A151U8Q71e-102A0A151U8Q7_CAJCA; Dr1-associated corepressor
STRINGGLYMA18G01040.12e-77(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111053139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.19e-48nuclear factor Y, subunit C13