PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19515
Common NameKK1_020084
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NF-X1
Protein Properties Length: 844aa    MW: 93705.1 Da    PI: 8.4227
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19515genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X123.98.9e-08226244119
       zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                    CG H+C++ CH+G CppC+
  C.cajan_19515 226 CGVHRCNEVCHRGSCPPCR 244
                    ******************7 PP
2zf-NF-X116.12.5e-05406422319
       zf-NF-X1   3 kHkCqklCHeGpCppCp 19 
                    +HkC ++CH+GpC pCp
  C.cajan_19515 406 NHKCPSPCHRGPCAPCP 422
                    7***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578503.0E-666135No hitNo description
PROSITE profilePS500168.52968131IPR019787Zinc finger, PHD-finger
PROSITE profilePS500898.78671129IPR001841Zinc finger, RING-type
PROSITE patternPS01359071128IPR019786Zinc finger, PHD-type, conserved site
CDDcd060081.07E-6162210No hitNo description
SMARTSM004380.072174192IPR000967Zinc finger, NF-X1-type
PfamPF014220.068174191IPR000967Zinc finger, NF-X1-type
SMARTSM00438270200222IPR000967Zinc finger, NF-X1-type
CDDcd060081.60E-10216264No hitNo description
SMARTSM004386.7E-5226245IPR000967Zinc finger, NF-X1-type
PfamPF014221.5E-5226244IPR000967Zinc finger, NF-X1-type
CDDcd060082.52E-9269316No hitNo description
SMARTSM004389.1E-4279298IPR000967Zinc finger, NF-X1-type
PfamPF014220.027279297IPR000967Zinc finger, NF-X1-type
CDDcd060081.33E-7323368No hitNo description
SMARTSM004380.16333353IPR000967Zinc finger, NF-X1-type
PfamPF014220.0029333352IPR000967Zinc finger, NF-X1-type
CDDcd060081.51E-8399442No hitNo description
SMARTSM004380.0079404423IPR000967Zinc finger, NF-X1-type
PfamPF014220.0091404422IPR000967Zinc finger, NF-X1-type
SMARTSM0043841467482IPR000967Zinc finger, NF-X1-type
PfamPF0142220471481IPR000967Zinc finger, NF-X1-type
SMARTSM0043880490535IPR000967Zinc finger, NF-X1-type
PfamPF01422170490499IPR000967Zinc finger, NF-X1-type
SMARTSM004384572599IPR000967Zinc finger, NF-X1-type
PfamPF014220.14572582IPR000967Zinc finger, NF-X1-type
SMARTSM004380.067609627IPR000967Zinc finger, NF-X1-type
PfamPF014222.1611626IPR000967Zinc finger, NF-X1-type
SMARTSM0043823672694IPR000967Zinc finger, NF-X1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0009651Biological Processresponse to salt stress
GO:0009908Biological Processflower development
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042335Biological Processcuticle development
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000037Biological Processregulation of stomatal complex patterning
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0000987Molecular Functioncore promoter proximal region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0016874Molecular Functionligase activity
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    Send to blast
MTSPWNHQPP PPLSDSDSDG GDDSSAAEPL RHSDLSNSIL KPYLALSGPS GGDLSKIQSF  60
LTSSSAGALS CLICLERIKP SDPTWSCSSL CFAVFHLICI QSWARHATRL PLSAAAASAA  120
ALWHCPKCRS EYSKSHIPKS YLCFCGKLEN PPNDPWILPH SCGEVCEKPL KHNCGHHCLL  180
LCHPGPCPSC PKLVKVPCFC GSHQDVRRCG FKEFSCNNPC SKILDCGVHR CNEVCHRGSC  240
PPCRTRGTHT CRCGRVKEER ECCDRVFQCD SPCEKRLSCG KHVCERGCHS GECGECPLKG  300
KRTCPCGKRV YEGMPCDAPV QLCGATCDKM LPCGYHRCPE RCHRGQCVET CRVVVKKSCR  360
CGSLKKDIWR VKGSVRQFVT VVGMLASGAA AMGIALPAQR RLRCKNHKCP SPCHRGPCAP  420
CPIMVTISCA CGETRFEVPC GTEMDQKPPR CPKRCPIAPL CRHASTCKPH KCHYGACPPC  480
RLPCAEEYQC GHACKLRCHG AKPPPNPEFT LKPKKKKIIQ QSESVPGTQC PPCPELVWRS  540
CVGQHIGAER MMVCSDKSQF SCENLCGNPL PCGNHYCTKT CHALENQLHG GESCEDCYLS  600
CQKEREPACP HHCPRRCHPG DCPPCKVLIK RSCHCGAMVH VFECIYYNSL SAKGQETARS  660
CGGPCHRKLP NCTHLCPETC HPGQCPNADK CCKKVTVRCK CQTLKKEWVC QDVQAAYHLD  720
GCHPRDIPKN QFGIGLIPCN SDCKSKVQVV ESELQLRKSI VTEVQEPDID KSVRKRRKRR  780
ERVLESKETS KLQKIISRTK QLLLFVFILV TLLAATYYGY KGLLWLSDWM NEVDERRQRY  840
SRIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1773779RKRRKRR
2773780RKRRKRRE
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional regulator. May mediate E2- or E3-dependent ubiquitination. Required to gate light sensitivity during the night. Regulates the speed of the clock by acting in the feedback loop between CCA1, LHY and APRR1/TOC1. Promotes the expression of CCA1 at night but not by days. This activational effect is enhanced by interaction with ADO1/ZTL. Association with ADO1/ZTL is not leading to the degradation of NFXL2. Confers sensitivity to osmotic stress such as high salinity. Prevents H(2)O(2) production and abscisic acid accumulation. Part of a regulatory network that integrates the biosynthesis and action of abscisic acid, reactive oxygen species and cuticle components. {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:21300918, ECO:0000269|PubMed:21429190, ECO:0000269|PubMed:22073231, ECO:0000269|PubMed:22516817}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19515
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Circadian-regulation with a peak of expression at or before dawn. Not regulated by biotic and abiotic stresses, by light and nutrient conditions or upon treatment with elicitors, chemicals, abscisic acid or phytohormones. {ECO:0000269|PubMed:21300918, ECO:0000269|PubMed:22073231}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208739.10.0NF-X1-type zinc finger protein NFXL2
SwissprotQ9FFK80.0NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
TrEMBLA0A151U9660.0A0A151U966_CAJCA; NF-X1-type zinc finger protein NFXL1
STRINGGLYMA18G03080.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102253237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.10.0sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors