PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19783
Common NameKK1_020365
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 317aa    MW: 35777.2 Da    PI: 9.4696
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19783genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14.2e-083074345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+ E +l+ +a + + ++   +W+++a++++ g+t  +++  + 
    C.cajan_19783 30 KWTPAENKLFENALAVYDKDtpdRWHKVAEMIP-GKTVMDVVKQYK 74
                     8********************************.***998887775 PP
2Myb_DNA-binding44.63.3e-14135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
    C.cajan_19783 135 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 179
                      8*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-42475IPR009057Homeodomain-like
PROSITE profilePS512938.7792680IPR017884SANT domain
SMARTSM007173.1E-102779IPR001005SANT/Myb domain
SuperFamilySSF466898.58E-122984IPR009057Homeodomain-like
CDDcd001672.16E-83076No hitNo description
PfamPF002491.4E-63074IPR001005SANT/Myb domain
PROSITE profilePS5129420.486128184IPR017930Myb domain
SuperFamilySSF466898.61E-17130183IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-17131183IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.6E-12132179IPR009057Homeodomain-like
SMARTSM007175.3E-13132182IPR001005SANT/Myb domain
CDDcd001672.41E-11135180No hitNo description
PfamPF002491.2E-12135179IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MKWEMEILPP ASPYMYNSSW LLDDNRNSTK WTPAENKLFE NALAVYDKDT PDRWHKVAEM  60
IPGKTVMDVV KQYKELEADV CNIEAGLIPI PGYSTTSPFT LDWVNTPGYD GFKGLAAKRS  120
SSGRPPDQER KKGVPWTEEE HKLFLLGLKK YGKGDWRNIS RNFVITRTPT QVASHAQKYF  180
IRQLSGGKDK RRASIHDITT VNLTESTTRS SPSEDSKRST SPPQPSMMLS HHQQPNSIAA  240
SSGMNFQWSN QPNGVAAMAL NPAHEQVFMS PYGLNSYGFK VQGQSLHRSP LHESSYLGPQ  300
TQNMVFQMQP SQHYSHA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A8e-1631961176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19783
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-171AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221325.10.0transcription factor DIVARICATA
SwissprotQ8S9H71e-129DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A151U9Y90.0A0A151U9Y9_CAJCA; Myb-like protein J
STRINGXP_007146740.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46634162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.13e-91Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]