PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19828
Common NameKK1_020411
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 523aa    MW: 57924.5 Da    PI: 7.1313
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19828genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.65.2e-33212269260
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                    dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers  +++++ei+Y+g+Hnh+k
  C.cajan_19828 212 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-EGQITEIVYKGTHNHPK 269
                    8****************************************.***************85 PP
2WRKY106.99.9e-34371429159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+
  C.cajan_19828 371 LDDGYRWRKYGQKVVKGNPNPRSYYKCTFPGCPVRKHVERASHDLRAVITTYEGKHNHD 429
                    59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-28208270IPR003657WRKY domain
SuperFamilySSF1182902.48E-25210270IPR003657WRKY domain
SMARTSM007749.5E-36211269IPR003657WRKY domain
PROSITE profilePS5081123.204212270IPR003657WRKY domain
PfamPF031061.7E-25212268IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-37356431IPR003657WRKY domain
SuperFamilySSF1182901.7E-29363431IPR003657WRKY domain
PROSITE profilePS5081138.033366431IPR003657WRKY domain
SMARTSM007741.5E-39371430IPR003657WRKY domain
PfamPF031067.3E-26372429IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    Send to blast
MTTSFSDLLS SPTTDNNLGG SERPLELWDH QTGSGVPKFK STPPPSLPLS HPPNNHSLPP  60
FSPSYFSIPH GLSLAELLDS PVLLHSSSVL PSPTTGSFAG QGFSWKSSYG ESEQHVKEED  120
KSFSSFSFQK QTHPPLPSST GFQSSTRIVQ NGWSFPETAK QDGFSSRMSM NMVKTETSFE  180
NNNHKGSFQS DYNNYQPPPP PPQVQTLSRR SDDGYNWRKY GQKQVKGSEN PRSYYKCTYP  240
NCPTKKKVER SLEGQITEIV YKGTHNHPKP QATKRNSLSA PSLAIPHSNI VSNETPHQIM  300
DSVATPENSS ISMEDDDFAH SKSGGDEFDN DEPDAKRWRI EGENEGISAV GSRTVREPRV  360
VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTFP GCPVRKHVER ASHDLRAVIT  420
TYEGKHNHDV PAARGSGSNP INRSLPNNTT NNTTSAATST YANNSLLRPE RPSQFNPNMQ  480
QNSGSFGFSG FGNPMGSYMN QQSDNVFPKE EPGDDSFLDS LLC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-37204432878Probable WRKY transcription factor 4
2lex_A3e-37204432878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19828
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195910.0EU019591.1 Glycine max WRKY62 (WRKY62) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212386.20.0WRKY transcription factor WRKY24
SwissprotQ6B6R41e-135WRK24_ORYSI; WRKY transcription factor WRKY24
TrEMBLA0A151UA500.0A0A151UA50_CAJCA; Putative WRKY transcription factor 33
STRINGGLYMA18G06360.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF107734114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-104WRKY DNA-binding protein 33
Publications ? help Back to Top
  1. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]