PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_19885

Common Name

KK1_020472

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Nin-like

Protein Properties

Length: 261aa MW: 29908.2 Da PI: 6.0512

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_19885	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	59	8.7e-19	164	212	3	51
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++++l dls yF+ pik+ Ak L+v+++v+K+ CR+ + RWP+Rk+ks C.cajan_19885 164 AKMTLGDLSDYFHIPIKETAKLLEVSTSVVKKVCRKAELYRWPQRKVKS 212 6899*******************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.322	140	233	IPR003035	RWP-RK domain
Pfam	PF02042	1.4E-17	165	212	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence Send to blast
MSLPHWPPSP KPFFCSCCQV LRQIIHTNGS RFDKLEIHGT IGMISHAIIR NTTPGDPSSN 60 YQMVDFCNRN KEEIKSFLKQ YCEQQNIFGY IIMKDPLSAY YDALSTGMDW AQDISDEDDD 120 LISENDVEQD QEPEPEPENE MASNARRLQV IVFVFLGSVA ERVAKMTLGD LSDYFHIPIK 180 ETAKLLEVST SVVKKVCRKA ELYRWPQRKV KSNMRKITVL RRGLANPGTR EKTRVEIQRL 240 QQEMVEYCGG LAPTGIEMLQ V

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_19885

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020204700.1	0.0	uncharacterized protein LOC109790026 isoform X1
TrEMBL	A0A151UAE3	0.0	A0A151UAE3_CAJCA; Uncharacterized protein
STRING	GLYMA20G01991.1	2e-84	(Glycine max)
STRING	GLYMA20G02005.1	2e-84	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7478	28	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	2e-09	RWP-RK domain-containing protein