PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19915
Common NameKK1_020502
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HSF
Protein Properties Length: 205aa    MW: 23661 Da    PI: 7.7684
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19915genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind105.83.6e-33351292102
                    HHHHHHHHHC...TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
   HSF_DNA-bind   2 Flkklyeile...deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                    Fl k+y++le    e+ ++++sw+++g++fvv+ + ef++  Lp+yFkh+nf+SF+RQLn+YgFkk++++          weFkh++Fk+g +++l
  C.cajan_19915  35 FLLKTYDLLEegeAENSTKIVSWNAEGTAFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYGFKKTSSKI---------WEFKHEKFKRGCRQML 121
                    9********9665567889***********************************************98765.........**************** PP

                    XXXXXXXX CS
   HSF_DNA-bind  95 ekikrkks 102
                     +i rkk 
  C.cajan_19915 122 GEITRKKC 129
                    *****986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.103.5E-3427121IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004158.2E-4031127IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467856.39E-2832127IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.1E-2935127IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.8E-113558IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.8E-117688IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.8E-1189101IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MDDHTNVLEL NLGLGSNLGG LHVGQSPRQR CPAPFLLKTY DLLEEGEAEN STKIVSWNAE  60
GTAFVVWSPA EFSELTLPRY FKHNNFSSFI RQLNTYGFKK TSSKIWEFKH EKFKRGCRQM  120
LGEITRKKCE PSVFPAYLKS CSEENATSST EDKNEQQLME ENKNLKKERL ELQMQIDECK  180
ALEIKLLACL SQFMDTHQNK VRKLC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B2e-16121273129Heat shock factor protein 1
5d5v_B2e-16121273129Heat shock factor protein 1
5d5v_D2e-16121273129Heat shock factor protein 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19915
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235512.11e-152heat shock factor protein HSF24
TrEMBLA0A151UAH31e-151A0A151UAH3_CAJCA; Heat shock factor protein HSF24
STRINGGLYMA01G34490.11e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113572839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.19e-37heat shock factor 4