PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20065
Common NameKK1_020661
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 210aa    MW: 23464.5 Da    PI: 9.6972
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20065genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00093628123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C++C+k+F+   +L  HirtH
  C.cajan_20065  6 FVCKYCSKRFPCGKSLGGHIRTH 28
                   89*********999999999999 PP
2zf-C2H211.90.00069155177123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++Cp+C + F++   L  H r+H
  C.cajan_20065 155 HECPICYRIFKSGQALGGHKRSH 177
                    79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.0E-4431IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.32E-9428No hitNo description
SMARTSM003550.14628IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.928633IPR007087Zinc finger, C2H2
PfamPF139122.5E-7630IPR007087Zinc finger, C2H2
PROSITE patternPS000280828IPR007087Zinc finger, C2H2
SuperFamilySSF576676.32E-9150177No hitNo description
SMARTSM003550.42155177IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.891155177IPR007087Zinc finger, C2H2
PfamPF139124.6E-11155177IPR007087Zinc finger, C2H2
PROSITE patternPS000280157177IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MEGRKFVCKY CSKRFPCGKS LGGHIRTHMT EERSNADGDN MFTKFDGVRK KRDLWCGTTR  60
KFDSLGHNLV GVSSKKIANG FDNKVYENDR KDGKYKCSEG EMDNGSYDSM DGSDENSSES  120
DSFPTPRSHN SKALNGKKKF NKAKKKLKSK KTKDHECPIC YRIFKSGQAL GGHKRSHFIG  180
GSEENTLVIK QAAPVVPCLI DLNLPAPVDE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20065
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215684.11e-83uncharacterized protein LOC109799518
TrEMBLA0A151UAX11e-154A0A151UAX1_CAJCA; Uncharacterized protein
STRINGXP_007158625.12e-59(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-23C2H2-like zinc finger protein