PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20106
Common NameKK1_020704
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 344aa    MW: 38539.6 Da    PI: 5.1343
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20106genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.95e-154898255
                   HHHHHHHHHHHHHHHHHH.HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  2 rrahnerErrRRdriNsa.feeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   r +h+e E+rRR++iN++ f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  C.cajan_20106 48 RSKHSETEQRRRSKINERqFQVLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 98
                   899*************9758*********9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.5764697IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-2146118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-1747126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.17E-1548102No hitNo description
PfamPF000101.9E-124898IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-1052103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MARSAKGHQD EFDDDDEEEL LTANTSSSLN NKVKVDEPSA GKRVNPHRSK HSETEQRRRS  60
KINERQFQVL RDLIPQNDQK RDKASFLLEV IEYIQFLQEK LQIYEQSYEG WNQEPAKLIP  120
WRNHHGPAEN TTVPSQAIQN GSVNEKNNNV SPSLPKNVQN PIESDFSLTT IPKGHTPGSA  180
AEAIPMAMQM RLDMFDPVVS SGMATQHLQE PVSIVDMPSH TQPQVWLNRP HKGSYILPHD  240
NTVKEQEEQV VESGSDSISS AYSQGILDTL TQVLQSSGVD MSQASVSVQI DVGRRANTEL  300
IPTAYSSKSL ENQFVSNPPV TRSGVDYCNI DSEQNPKRLR QEAS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20106
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0981320.0BT098132.1 Soybean clone JCVI-FLGm-12G7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212101.10.0transcription factor BIM2
TrEMBLA0A151UAW40.0A0A151UAW4_CAJCA; Transcription factor BIM2
STRINGGLYMA08G28010.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-54BES1-interacting Myc-like protein 2