PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20209
Common NameKK1_020810
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 92aa    MW: 10447.8 Da    PI: 10.1051
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20209genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-0822581854
                   HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   +  ++Lr+l+P+ + + +s K+s + +L+++++YI+sL
  C.cajan_20209 22 ELVSKLRQLVPEiR-SRRSDKVSASKVLQETCNYIRSL 58
                   56689*******77.89*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.185458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-91877IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-81874IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-52258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MSSRRSRQHS GSTRISDDQI IELVSKLRQL VPEIRSRRSD KVSASKVLQE TCNYIRSLHR  60
EVNDLSERLA QLLTTIDADS AEAGIIRSLL NQ
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. May have a regulatory role in various aspects of gibberellin-dependent growth and development. {ECO:0000269|PubMed:16527868}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20209
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0948781e-115BT094878.1 Soybean clone JCVI-FLGm-6I10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221012.12e-58transcription factor PRE6
SwissprotQ9LJX11e-40PRE5_ARATH; Transcription factor PRE5
TrEMBLA0A151UB764e-57A0A151UB76_CAJCA; Transcription factor bHLH135
STRINGXP_007139582.12e-56(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.15e-43bHLH family protein