PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20528
Common NameKK1_021142
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 253aa    MW: 29262 Da    PI: 7.103
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20528genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.51.1e-152194269
       trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegek 69
                   Wt+qe+ +Li+a++e++ +l+rg l+ ++Weev+ ++             +s+ qC++k+e+l++r++++k++  
  C.cajan_20528 21 WTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVaarcgydL-AHPAKSALQCRHKMEKLRQRHRAEKKHPA 94
                   *************************************86666522.23368*******************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.4E-1520105No hitNo description
PROSITE profilePS500906.042083IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MATPNDAASA SPPKKPHPIP WTHQETVHLI RAYQEKWYAL KRGPLRHNQW EEVAVVVAAR  60
CGYDLAHPAK SALQCRHKME KLRQRHRAEK KHPAAAWQYN ALMDDLERGP LPISALAPFQ  120
NDDDDDDERD DDDDACRNDT HFDHRESFIK SKSLNCILGE RPVRGFARER VDEPDGDDDD  180
VSGLSAEMRA FAERFIGMEN LKMEMVKETQ RCRLEMEKKR IQMILESQRR IVDSIARAFA  240
SNKRIKITHQ ISN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20528
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-101AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213596.10.0uncharacterized protein LOC109797854
TrEMBLA0A151UC300.0A0A151UC30_CAJCA; Uncharacterized protein
STRINGXP_007134090.11e-129(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF100872835
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.15e-35Trihelix family protein