PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20908
Common NameKK1_021535
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 62aa    MW: 6824.91 Da    PI: 10.3386
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20908genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00042826220
                   EETTTTEEESSHHHHHHHH CS
        zf-C2H2  2 kCpdCgksFsrksnLkrHi 20
                   +C++C+k+Fs+   +  H+
  C.cajan_20908  8 VCKICDKCFSNGKVMGGHM 26
                   7********9876666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.29E-5634No hitNo description
PROSITE profilePS501579.369734IPR007087Zinc finger, C2H2
PROSITE patternPS000280929IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    Send to blast
LRKNNSKVCK ICDKCFSNGK VMGGHMRPHF AKLPIPPKPE TKNQALDNSA ELTCRPNQSA  60
SS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20908
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214422.12e-30zinc finger protein ZAT9
TrEMBLA0A151TLL53e-38A0A151TLL5_CAJCA; Uncharacterized protein (Fragment)
STRINGGLYMA09G36450.23e-27(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1731457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.19e-10C2H2-like zinc finger protein