PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20921
Common NameKK1_021548
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 257aa    MW: 29029.6 Da    PI: 10.2636
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20921genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00092153175123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    +kC +Cgk F ++  L  H  +H
  C.cajan_20921 153 FKCDKCGKIFQSHQALGGHKANH 175
                    89*********999998888877 PP
2zf-C2H217.71e-05204226123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++Cp+C+k+F++   L  H ++H
  C.cajan_20921 204 FECPYCSKVFKSARALGGHKKVH 226
                    89**************9999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139125.8E-9153177IPR007087Zinc finger, C2H2
SuperFamilySSF576677.31E-11153226No hitNo description
SMARTSM003550.066153175IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.741153180IPR007087Zinc finger, C2H2
PROSITE patternPS000280155175IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.4E-4200226IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.2E-8203226IPR007087Zinc finger, C2H2
SMARTSM003550.0019204226IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.824204231IPR007087Zinc finger, C2H2
PROSITE patternPS000280206226IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MGGHMRSHFA KLPIPPKPET KNQALDNSAE LTYRPNQSAS SQTSQSQKKP AQNFRSLKRS  60
LFSFSTNTNR ENEFRPYPKN PTRKRSKCHR KFIAAIEMKA DSEQVTPKPD SLFAEEAARS  120
LLMLSKDKWP ESKEIKNQEV KEIRAKDKED ANFKCDKCGK IFQSHQALGG HKANHKKNEN  180
TWQGGDPDND GTSKKSDDVG EKVFECPYCS KVFKSARALG GHKKVHFSYN KANAQSSANQ  240
FGRKLVVDLN FPAPIED
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20921
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214422.11e-116zinc finger protein ZAT9
TrEMBLA0A151TLK20.0A0A151TLK2_CAJCA; Zinc finger protein 1
STRINGGLYMA09G36450.21e-123(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1538968
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.12e-30C2H2-like zinc finger protein