PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_21167
Common NameKK1_021795
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 143aa    MW: 17321.8 Da    PI: 5.8332
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_21167genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS129.73.3e-401140234373
           GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpl 329
                    ++P++++ +  + + n++ F +rf eal +y +l+d+ +a +pre+e+r+ +Ere++gre++nv+aceg+er+er et++kW  r ++aGFk++pl
  C.cajan_21167   1 IKPDIFTQTVINGSFNAPFFTTRFREALFHYYTLYDMCDAVVPRENEWRMLIEREIVGREAMNVIACEGSERIERPETYKKWYIRNTRAGFKQLPL 96 
                    69********************************************************************************************** PP

           GRAS 330 sekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                    +e+ +++ ++ lr+ + + + v+e+++++++gWk+r L++ S+W
  C.cajan_21167  97 NEELMEKCRSQLREWYHRDFFVDEDNEWMLQGWKGRVLYASSCW 140
                    ****************999************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035141.1E-371140IPR005202Transcription factor GRAS
PROSITE profilePS5098523.5491121IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
IKPDIFTQTV INGSFNAPFF TTRFREALFH YYTLYDMCDA VVPRENEWRM LIEREIVGRE  60
AMNVIACEGS ERIERPETYK KWYIRNTRAG FKQLPLNEEL MEKCRSQLRE WYHRDFFVDE  120
DNEWMLQGWK GRVLYASSCW VPA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_21167
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214790.11e-101scarecrow-like protein 33 isoform X1
RefseqXP_029127111.11e-101scarecrow-like protein 33 isoform X2
SwissprotP0C8843e-61SCL34_ARATH; Scarecrow-like protein 34
TrEMBLA0A151TMA01e-100A0A151TMA0_CAJCA; Scarecrow-like protein 33 (Fragment)
TrEMBLA0A151TME31e-103A0A151TME3_CAJCA; Scarecrow-like protein 34 (Fragment)
STRINGGLYMA11G14720.25e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14801813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29065.11e-63GRAS family protein