PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_21534
Common NameKK1_022169
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 86aa    MW: 9683.06 Da    PI: 10.7162
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_21534genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.61.9e-191548134
           GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                   C +C +t+Tp+WR+gp g+ktLCnaCG++yr+ +
  C.cajan_21534 15 CMHCEVTSTPQWREGPMGPKTLCNACGVRYRSGR 48
                   99*****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011411.978945IPR000679Zinc finger, GATA-type
SMARTSM004015.4E-16959IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.62E-151171No hitNo description
Gene3DG3DSA:3.30.50.101.6E-151346IPR013088Zinc finger, NHR/GATA-type
CDDcd002022.52E-131461No hitNo description
PROSITE patternPS0034401540IPR000679Zinc finger, GATA-type
PfamPF003203.2E-171549IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    Send to blast
MKRSSSQESV ATRKCMHCEV TSTPQWREGP MGPKTLCNAC GVRYRSGRLF AEYRPAASPT  60
FVASLHSNSH KKVLEIRNRA TQESVR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_21534
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0984952e-96BT098495.1 Soybean clone JCVI-FLGm-12F13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215002.18e-58GATA transcription factor 11
RefseqXP_029127183.18e-58GATA transcription factor 11
SwissprotQ9SV309e-41GATA8_ARATH; GATA transcription factor 8
TrEMBLA0A151TNB62e-57A0A151TNB6_CAJCA; GATA transcription factor 10
STRINGGLYMA12G08131.15e-52(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57582849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-43GATA family protein
Publications ? help Back to Top
  1. Choi D, et al.
    iNID: an analytical framework for identifying network models for interplays among developmental signaling in Arabidopsis.
    Mol Plant, 2014. 7(5): p. 792-813
    [PMID:24380880]
  2. Li T,Wu XY,Li H,Song JH,Liu JY
    A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network.
    Mol Plant, 2016. 9(5): p. 650-661
    [PMID:26961720]