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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | C.cajan_21855 | ||||||||
| Common Name | KK1_022505 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family | bZIP | ||||||||
| Protein Properties | Length: 329aa MW: 37205.9 Da PI: 5.4624 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 33.6 | 8.7e-11 | 201 | 244 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L +
C.cajan_21855 201 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 244
899*********************************98877655 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 3.8E-14 | 197 | 261 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF07716 | 2.7E-9 | 198 | 246 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 9.622 | 199 | 251 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:1.20.5.170 | 2.1E-11 | 201 | 252 | No hit | No description |
| SuperFamily | SSF57959 | 3.66E-11 | 201 | 255 | No hit | No description |
| CDD | cd14703 | 1.06E-22 | 202 | 252 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 204 | 219 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
| GO:0005634 | Cellular Component | nucleus | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 329 aa Download sequence Send to blast |
MAQLPPKIPN MAPTWPDFSS LHQKMPSLKT MSSNQNPSWV DEFLDFSAAR RGTHRRSVSD 60 SITFLEAPLL DHHPCKDGST GGGGDDNEFE RFDDEQFMSM FSDEASGNNN SNNNNNNTMV 120 AHTSLSSSNP STPSDHNSIN DEKEIMNKEK EEEEEEEKKQ LKNESDEDES HCKQETTQPP 180 NNDNDSNANA TCSSDKITDP KRVKRILANR QSAQRSRVRK LQYISELERS VTSLQAEVSV 240 LSPRVAFLDH QRLLLNVDNS ALKQRIAALA QDKIFKDAHQ EALKREIERL RQVYHQQNIK 300 KMASAADSPS QSPKPRCDTL TEKEQLINV |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. | |||||
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | C.cajan_21855 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | AP015039 | 8e-53 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. | |||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020214716.1 | 0.0 | basic leucine zipper 61 | ||||
| Swissprot | Q9M2K4 | 1e-118 | BZP61_ARATH; Basic leucine zipper 61 | ||||
| TrEMBL | A0A151TPA9 | 0.0 | A0A151TPA9_CAJCA; Transcription factor RF2a | ||||
| STRING | XP_007132694.1 | 1e-166 | (Phaseolus vulgaris) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF2011 | 34 | 88 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G58120.1 | 8e-69 | bZIP family protein | ||||
| Publications ? help Back to Top | |||
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