PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_21862
Common NameKK1_022513
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 256aa    MW: 28165.1 Da    PI: 7.0225
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_21862genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.3e-1370116354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h+e+ErrRR+riN  +++Lr+++P a      K++Ka+ L ++++++k+L
  C.cajan_21862  70 KSHSEAERRRRARINAHLDTLRSVIPGA-----IKMDKASLLGEVIRHLKEL 116
                    58*************************9.....7****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.0567116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-1370119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-1070116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-1371120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-1273122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.71E-480118No hitNo description
CDDcd048731.27E-6155226No hitNo description
Gene3DG3DSA:3.30.70.2606.4E-5155197No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MEAFLWGDDI DGDAPKGKSD GFGGNNGVIG SGCGSSFSLV LDGERGELVE APVKLERKGV  60
STERSIEALK SHSEAERRRR ARINAHLDTL RSVIPGAIKM DKASLLGEVI RHLKELKKNA  120
AQACEGLMIP KDNDEISVEE QEGGLNGFPY SIRASLCCEY KPGLLSDIRQ ALDALHLMII  180
RADIATLEGR MKNVFVIISC KEQNFEDAAY RQFLAGSVHQ ALRSVLNRFS VSQDLLGTRK  240
RRRISIFSSS SLEDFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238242RKRRR
2239243KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_21862
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0937010.0BT093701.1 Soybean clone JCVI-FLGm-17L23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215241.10.0transcription factor bHLH30
TrEMBLA0A151TP700.0A0A151TP70_CAJCA; Transcription factor bHLH30
STRINGGLYMA12G14400.11e-171(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-30bHLH family protein