PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22459
Common NameKK1_023121
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 192aa    MW: 21776.4 Da    PI: 6.2818
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22459genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-17101151255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+++AeIrdp++     r++lg+f ++ +Aaka++ a+ +++g
  C.cajan_22459 101 RYRGVRRRP-WGKFAAEIRDPRKK--GSRVWLGTFESEIDAAKAYDCAAFRMRG 151
                    7********.**********9653..3**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-12101151IPR001471AP2/ERF domain
PROSITE profilePS5103224.197101159IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-31101160IPR001471AP2/ERF domain
SMARTSM003803.0E-35101165IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-22101161IPR016177DNA-binding domain
PRINTSPR003673.6E-13102113IPR001471AP2/ERF domain
CDDcd000182.98E-23109159No hitNo description
PRINTSPR003673.6E-13141161IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MATEEETTTL KLLRQYLLGD VSDPFLNNLI PVKLEDPSSS DLDLGANFPE QSSFCTFLEC  60
FDLEADTEVH EVQIQNSTAT SPPQNSFFAE AMVSEKKEAR RYRGVRRRPW GKFAAEIRDP  120
RKKGSRVWLG TFESEIDAAK AYDCAAFRMR GQKAVLNFPL EAGNYHPEPN TCGRKRRREY  180
TTPATTSTHV MS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-2898160264ATERF1
3gcc_A6e-2898160264ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173177RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22459
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0900815e-96BT090081.1 Soybean clone JCVI-FLGm-3H9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222478.11e-143ethylene-responsive transcription factor ERF107
TrEMBLA0A151T0Z71e-142A0A151T0Z7_CAJCA; Ethylene-responsive transcription factor ERF106 family
STRINGGLYMA20G33800.11e-103(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52573056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.13e-34ERF family protein