PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22852
Common NameKK1_023525
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 349aa    MW: 38982.3 Da    PI: 7.8565
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22852genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.14.1e-54151421128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                    lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i++vd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ 
  C.cajan_22852  15 LPPGFRFHPTDEELVVHYLKRKAASAPLPV-SIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSd 109
                    79****************************.89***************8888999**************************************996 PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl
  C.cajan_22852 110 GHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 142
                    7788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-6510180IPR003441NAC domain
PROSITE profilePS5100562.01515180IPR003441NAC domain
PfamPF023652.1E-2816142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MDSTDSSSGS QHPKLPPGFR FHPTDEELVV HYLKRKAASA PLPVSIIADV DLYKFDPWEL  60
PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSDG HQKVGVKKAL  120
VFYGGKPPKG VKTNWIMHEY RLTNDSFNSS SKPPPLAHDS PNKKNSLRLD DWVLCRIYKK  180
SNSNTLPRPL LMEHDEELSM ENMLPTMSTL SMANHNTNMQ NSKPPSSRST TLGLENDDNF  240
FDGILAVDHS MQNGSDSHSF SPNSKGNDNT TNFPMKRAMS TSQQLWNNET GSPGSSSSCK  300
RFHGDLNSAE DNDSFVSLLN QFPHNAAFHG SVGDGALRQQ FQLHGMNWN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-751518320171NAC domain-containing protein 19
3swm_B3e-751518320171NAC domain-containing protein 19
3swm_C3e-751518320171NAC domain-containing protein 19
3swm_D3e-751518320171NAC domain-containing protein 19
3swp_A3e-751518320171NAC domain-containing protein 19
3swp_B3e-751518320171NAC domain-containing protein 19
3swp_C3e-751518320171NAC domain-containing protein 19
3swp_D3e-751518320171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00058PBMTransfer from AT1G61110Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22852
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222513.10.0NAC transcription factor 25
SwissprotQ8GY421e-111NAC25_ARATH; NAC transcription factor 25
TrEMBLA0A151T2920.0A0A151T292_CAJCA; NAC domain-containing protein 18
STRINGXP_007159283.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16233498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-114NAC domain containing protein 25