PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22947
Common NameKK1_023622
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 346aa    MW: 38584.3 Da    PI: 5.1757
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22947genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.72.1e-15183219135
           GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                    C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  C.cajan_22947 183 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 219
                    *****99999************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5132013.7744378IPR010399Tify domain
SMARTSM009792.6E-84378IPR010399Tify domain
PfamPF062004.4E-114677IPR010399Tify domain
PROSITE profilePS5101712.798114156IPR010402CCT domain
PfamPF062035.8E-15114155IPR010402CCT domain
PROSITE profilePS501148.669177234IPR000679Zinc finger, GATA-type
SMARTSM004012.3E-13177230IPR000679Zinc finger, GATA-type
SuperFamilySSF577166.18E-12179230No hitNo description
Gene3DG3DSA:3.30.50.105.5E-15181224IPR013088Zinc finger, NHR/GATA-type
CDDcd002025.57E-14182225No hitNo description
PROSITE patternPS003440183210IPR000679Zinc finger, GATA-type
PfamPF003202.1E-13183219IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MDTVNHHRED PPPLPMHLDT FHHANASDEG EQPAPLAIAS SAPHARTSEL TISFEGEVYV  60
FPAVTPDKVQ AVLLLLGGQE MQNNGPASDI LLQQNCQDIR GINDPSRNSK LSRRFASLVR  120
FREKRKERCF EKKIRYSCRK EVAQRMHRKN GQFASLKEDY KSPTENWDSS NGTPCPESIE  180
RRCQHCGISE KSTPAMRRGP AGPRSLCNAC GLMWANKGTL RDLSKAGRVA FEQNELDTSA  240
DIKPSTTEAE HSCANPDKEG SPEETKPVQM DSRQSPEKTN GQFIIGTDES VTDNLSIQVE  300
NQALNLHEQD TLEDLADASG TEFEIPAGFD DQXXXXXXXX XXSCWF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22947
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0063589e-50AP006358.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT36C13, TM0100b, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222142.10.0GATA transcription factor 28 isoform X2
SwissprotQ5Z4U56e-59GAT20_ORYSJ; GATA transcription factor 20
TrEMBLA0A151T2C20.0A0A151T2C2_CAJCA; GATA transcription factor 25
STRINGGLYMA07G30140.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33193364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.28e-52ZIM-like 1