PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23115
Common NameKK1_023794
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WOX
Protein Properties Length: 372aa    MW: 42397.6 Da    PI: 8.3334
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23115genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.63.9e-2293152357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
       Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                    +R+++t+eql++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  C.cajan_23115  93 SRWNPTPEQLRALEELYRRgTRTPSAEQIQQITAQLrrfgKIEGKNVFYWFQNHKARERQ 152
                    7*****************99**************************************97 PP
2Wus_type_Homeobox114.64.8e-3792154365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+
      C.cajan_23115  92 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKR 154
                        79***********************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003899.5E-590157IPR001356Homeobox domain
PfamPF000467.4E-2093152IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.9E-993152IPR009057Homeodomain-like
SuperFamilySSF466899.41E-1393159IPR009057Homeodomain-like
CDDcd000867.52E-794154No hitNo description
PROSITE profilePS5007111.45198153IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048513Biological Processanimal organ development
GO:0099402Biological Processplant organ development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MWMVGYNEGG DFNMADYAFN GRKLRPLMPR PVTSPNNTST TNSPCLSRIH HGNDFFSQYH  60
NLVYMYKEFL VLLASVAGQG KREFNPPPVV VSSRWNPTPE QLRALEELYR RGTRTPSAEQ  120
IQQITAQLRR FGKIEGKNVF YWFQNHKARE RQKRRRQMES AAEGHHTRDF DSTLEKKDLG  180
ASRTVFEVEQ TKNWAPSTNC STLAEESVSI RRAAKAAVAE CRTDGWLQFD EGELQQRKNF  240
MERNATWHMM QLSCPAPPTV SPHLLNTPPI TSTTSMATTT TVTARVMDPK LIKAHDLSFF  300
ISPNRENGII HLSSISTQDD NNFVESQTLQ LFPIRNGDES SDDNINQQKE TDVSASAMNA  360
PSQFFEFLPL KN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23115
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-144AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215790.10.0WUSCHEL-related homeobox 1
TrEMBLA0A151TK730.0A0A151TK73_CAJCA; WUSCHEL-related homeobox 1
STRINGGLYMA05G33850.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28923471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.12e-60WUSCHEL related homeobox 1