PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23477
Common NameKK1_024164
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 243aa    MW: 27478.3 Da    PI: 9.0238
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23477genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-19132181255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+W+AeIrdp    ++  r++lg+f tae Aa+a+++a ++++g
  C.cajan_23477 132 KYRGVRQRP-WGKWAAEIRDP----IKaSRVWLGTFQTAEAAARAYDEASLRFRG 181
                    8********.**********7....357************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.8E-33131190IPR001471AP2/ERF domain
PROSITE profilePS5103225.067132189IPR001471AP2/ERF domain
SMARTSM003801.6E-35132195IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-22132191IPR016177DNA-binding domain
PfamPF008476.5E-13132181IPR001471AP2/ERF domain
CDDcd000184.61E-32132191No hitNo description
PRINTSPR003677.6E-12133144IPR001471AP2/ERF domain
PRINTSPR003677.6E-12155171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MFSGLNRERE MSAMISALTH VVCGEDHSIN NNNNNNNNNS EVFVTSNMAC ASVAVAPSSS  60
HGGNSVLKRR REEDNTNTNT NTSFGEFSRE ASQPAISTIT ESSSRNREYE YEYEYEYKSE  120
EKGRREEQER RKYRGVRQRP WGKWAAEIRD PIKASRVWLG TFQTAEAAAR AYDEASLRFR  180
GNKAKLNFPE NVRLRQPNPP TLYHHIPMSS HNVQSSPLLS SSSTMTSPQP PPVPSIHLPS  240
HSM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-22131192163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23477
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215728.11e-180ethylene-responsive transcription factor ABR1
TrEMBLA0A151TL781e-179A0A151TL78_CAJCA; Ethylene-responsive transcription factor ERF114 family
STRINGGLYMA05G32040.13e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.12e-23ERF family protein