PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23511
Common NameKK1_024198
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 260aa    MW: 29265.8 Da    PI: 6.2652
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23511genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08135175954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  C.cajan_23511 135 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 175
                    699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.951126175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-14131194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-12132181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.17E-10132180No hitNo description
Gene3DG3DSA:4.10.280.103.9E-12132184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-6136175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0010500Biological Processtransmitting tissue development
GO:0048462Biological Processcarpel formation
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MNTNNQSAFT NVNSTWNLEK METNEQQDDH HDIILQVHDP MNSGIWPNNY QNQNLNLVHQ  60
MHQTPTTTSS SGFLSDILGV HNVEEDEEPE EELGAMKEMM YKIAAMQPVD IDPATIRKPK  120
RRNVRISDDP QSVAARHRRE RISEKIRILQ RLVPGGTKMD TASMLDEAIR YVKFLKRQIR  180
LLQSIPQTSQ PQPQCITTHH ASSTFLLAPS CDWSFAPNLL LSSTAVATAA IDMPPGLGFH  240
GHAHACDASS SFNHHEVISE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23511
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC1923741e-139KC192374.1 Phaseolus vulgaris cultivar BAT93 indehiscent-like protein gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215854.10.0transcription factor HEC3
TrEMBLA0A151TLB40.0A0A151TLB4_CAJCA; Transcription factor IND
STRINGGLYMA05G32410.21e-142(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.18e-48bHLH family protein