PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_23518

Common Name

KK1_024205

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

NAC

Protein Properties

Length: 338aa MW: 37593.5 Da PI: 4.6774

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_23518	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.3	1.6e-45	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 l pGfrFhPt elvv++Lk+kv gkk+ vi+e+diyk+ PwdLp + +++++e ewyfF++r+kky +g+r +rat+ gyWkatg+d+ v + C.cajan_23518 6 LIPGFRFHPTGVELVVYFLKRKVMGKKFCD-GVIAELDIYKYAPWDLPdMsCLRTGELEWYFFCSREKKYCSGSRMKRATEIGYWKATGQDRVVRH 100 579**********************877.89**********96347788888********************************99 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg ktL+f++g++p+g++tdWvmhe rl C.cajan_23518 101 -NNQTVGKIKTLIFHTGKSPHGKRTDWVMHEHRL 133 .999*************************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-54	5	156	IPR003441	NAC domain
PROSITE profile	PS51005	52.077	6	156	IPR003441	NAC domain
Pfam	PF02365	1.5E-21	8	133	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
MARKKLIPGF RFHPTGVELV VYFLKRKVMG KKFCDGVIAE LDIYKYAPWD LPDMSCLRTG 60 ELEWYFFCSR EKKYCSGSRM KRATEIGYWK ATGQDRVVRH NNQTVGKIKT LIFHTGKSPH 120 GKRTDWVMHE HRLEDKDLAD KGIAQDSYVV CKVFQKEGRG PRNGAQYGRP FNEEDWDGEE 180 LGIPCAALSA PLPILPMTSD GSVPNDNDLH AVGCIGLAST SCLSGSMPSP GTANPSEPNE 240 KAVNNDDDDI LSMLEIFKED NFFEKVDNPG LENIAEGAAL DGFFEGLEDY MAGFFSGQIT 300 GFGTNEMATT GDVGSFDNLD FLELIDLDPP LFMPTTQP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-43	1	157	12	166	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-43	1	157	12	166	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-43	1	157	12	166	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-43	1	157	12	166	NO APICAL MERISTEM PROTEIN
3swm_A	1e-43	1	157	15	169	NAC domain-containing protein 19
3swm_B	1e-43	1	157	15	169	NAC domain-containing protein 19
3swm_C	1e-43	1	157	15	169	NAC domain-containing protein 19
3swm_D	1e-43	1	157	15	169	NAC domain-containing protein 19
3swp_A	1e-43	1	157	15	169	NAC domain-containing protein 19
3swp_B	1e-43	1	157	15	169	NAC domain-containing protein 19
3swp_C	1e-43	1	157	15	169	NAC domain-containing protein 19
3swp_D	1e-43	1	157	15	169	NAC domain-containing protein 19
4dul_A	1e-43	1	157	12	166	NAC domain-containing protein 19
4dul_B	1e-43	1	157	12	166	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_23518

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020215850.1	0.0	NAC domain-containing protein 82
TrEMBL	A0A151TLE2	0.0	A0A151TLE2_CAJCA; NAC domain-containing protein 78
STRING	GLYMA08G16630.1	1e-179	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3302	34	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.4	3e-92	NAC domain containing protein 82