PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23644
Common NameKK1_024331
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 229aa    MW: 25501.3 Da    PI: 9.3954
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23644genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.6e-055476123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C++C++ Fs++  L  H++ H
  C.cajan_23644 54 FSCNYCKREFSSSQALGGHQNAH 76
                   89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.64E-75181No hitNo description
Gene3DG3DSA:3.30.160.601.6E-45280IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.9E-65478IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.7595481IPR007087Zinc finger, C2H2
PROSITE patternPS0002805676IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MKHSEKRLKA SKELVDFMKL SKDNMAQEPS SSKVVDSPNF YAKGDDENNN AKTFSCNYCK  60
REFSSSQALG GHQNAHKQER ALAKRRQGFD DGGFGHYPYY PYPTFYNSHS LYGGSFNRAL  120
GVRTDSMIHK HSWTPRYDHT WLKKNPHGVS SSSLFDGFGI MKGDASAGLR PEYGNANVGT  180
LSLFEKGFTN SSSQIETTPT VAARIDAHPS MPQETSKEAS LNLDLSLKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23644
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229080.11e-173uncharacterized protein LOC109810107
TrEMBLA0A151SG381e-171A0A151SG38_CAJCA; Zinc finger protein 3
STRINGGLYMA06G14783.13e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18223074
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.16e-19C2H2 family protein