PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23878
Common NameKK1_024674
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 247aa    MW: 27408.4 Da    PI: 8.6174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23878genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-1461107354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    r+h+e+ErrRR+riN  +++Lr+++P a     kKl+Ka+ L ++++++k+L
  C.cajan_23878  61 RNHSEAERRRRARINAHLDTLRTVIPGA-----KKLDKATLLGEVIRHLKEL 107
                    58*************************9.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.39358107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.15E-1461113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1361109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-1261107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.3E-1364113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.06E-471109No hitNo description
Gene3DG3DSA:3.30.70.2605.8E-6146188No hitNo description
SuperFamilySSF550216.41E-5146224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MEAFAPQRIS DGFQVSCGVI GSGYASSSSL VLDKEKGELV EAPVKLERKG VSPERSIEAL  60
RNHSEAERRR RARINAHLDT LRTVIPGAKK LDKATLLGEV IRHLKELKTN AAQASEGLMI  120
PKDSDEIRVE EQEGGLYGFP YSIKASLCCE YKPGLLSDIR QALDALHLMI TRAEIATLGG  180
RMKNVFVIIS CKEQSVEDAE YRQFLAGSVH QALRSVLDRF SVSQDMLESR KRRRISIFSS  240
SSIGDFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229233RKRRR
2230234KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23878
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229466.11e-180transcription factor bHLH30
TrEMBLA0A151SEV01e-178A0A151SEV0_CAJCA; Transcription factor bHLH30
STRINGGLYMA12G33751.11e-153(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.17e-31bHLH family protein