PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23954
Common NameKK1_024754
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 225aa    MW: 25688 Da    PI: 4.7352
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23954genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.6e-101664555
                   HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    + +E++RR+++++ +++L ++lP+ +   p++ +     + +A++YIksL+
  C.cajan_23954 16 RKVVEKNRRNQMKNLYSQLYSILPTyN---PKEAVPLPNQVDEAINYIKSLE 64
                   6789*********************66...9999****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.49E-12985IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.68E-4968No hitNo description
PROSITE profilePS5088811.021163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-111386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-61664IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00261769IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MDQQQGSQPS STKVERKVVE KNRRNQMKNL YSQLYSILPT YNPKEAVPLP NQVDEAINYI  60
KSLEKKVKTA QEKKERLLTE RERTRSGFSS ASEAQGSMKS AKIDIHETDS SLQVFLTCGV  120
ENQFIFCEII RILHEENVEV ISANSSMVGD SMLHVVRGEI RQSLFQIGAT KVSERLKRFV  180
YASISDVEME TDFWDFEIGS DIWELLDPTL DNCLQLEGDI DTSNI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23954
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229428.11e-167transcription factor bHLH162
TrEMBLA0A151SEZ91e-166A0A151SEZ9_CAJCA; Transcription factor bHLH36
STRINGGLYMA12G33260.19e-93(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-30bHLH family protein