PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24081
Common NameKK1_025445
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 161aa    MW: 18385.1 Da    PI: 4.4012
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24081genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.17.1e-12649146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     rg+W++++  l+++av++lG++ ++ I + ++ g+t+ q+k+++ k
    C.cajan_24081  6 RGKWSKQDTGLFYEAVRELGTD-FSMIQQLFP-GKTRHQIKLKYKK 49
                     89********************.*********.***********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.306155IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-7349IPR009057Homeodomain-like
PfamPF159632.6E-27383No hitNo description
SMARTSM007174.7E-8553IPR001005SANT/Myb domain
SuperFamilySSF466896.28E-11755IPR009057Homeodomain-like
CDDcd001671.51E-6849No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MEKAPRGKWS KQDTGLFYEA VRELGTDFSM IQQLFPGKTR HQIKLKYKKE ERENPSLLTD  60
AVNNRAKDHS HYKLLIERLQ DASNKAEVDP SRDASDFMAV DEVLDLTPAT NNEEAAEVAT  120
TKQEDDVKAQ EDSVAVPSPE QSDDSDDDFQ KWSQYKSVFD E
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24081
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230168.11e-109uncharacterized protein LOC109810960 isoform X5
RefseqXP_029129722.11e-109uncharacterized protein LOC109810960 isoform X4
TrEMBLA0A151SD131e-114A0A151SD13_CAJCA; Transcription factor TFIIIB component B
STRINGGLYMA01G43821.12e-71(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36662938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.25e-26MYB_related family protein