PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24148
Common NameKK1_024822
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ZF-HD
Protein Properties Length: 145aa    MW: 17163.4 Da    PI: 9.5124
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24148genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer72.85.3e-231421759
    ZF-HD_dimer 17 lGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                   +Ggh++DGCgEfmp+ ge+gt++++kCaAC+CHRnFHR+e e 
  C.cajan_24148  1 MGGHVTDGCGEFMPN-GEDGTPESFKCAACDCHRNFHRKEAEG 42
                   7*************8.999********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047701.5E-20140IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257746.0E-15143IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152318.86139IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015663.6E-21139IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466891.47E-1872142IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.5E-2877143IPR009057Homeodomain-like
TIGRFAMsTIGR015652.7E-2682138IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MGGHVTDGCG EFMPNGEDGT PESFKCAACD CHRNFHRKEA EGEPQYVLNY HHTYSYKNNR  60
NIIHSPQSHL QFPIPHHHLH GKRFRTKFTQ QQKDRMIEFA EKLGWKIQKQ DEQELHQFCS  120
QVGVKRQAFK VWMHNSKQAM KKKQM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A2e-21821391875ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24148
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU5604231e-123EU560423.1 Cajanus cajan glycinin gene, promoter region.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229558.21e-95zinc-finger homeodomain protein 6
SwissprotQ9ZPW72e-44ZHD6_ARATH; Zinc-finger homeodomain protein 6
TrEMBLA0A151SEG01e-106A0A151SEG0_CAJCA; ZF-HD homeobox protein At4g24660 family
STRINGXP_007156052.15e-76(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20634253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.19e-47homeobox protein 24