PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24232
Common NameKK1_024907
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 291aa    MW: 32763.6 Da    PI: 6.3508
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24232genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-192978255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  C.cajan_24232 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAALAYDEAARRLYG 78
                   69****999.**********965...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.21E-312887No hitNo description
PfamPF008472.2E-132978IPR001471AP2/ERF domain
SMARTSM003806.3E-362992IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-302987IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-212987IPR016177DNA-binding domain
PROSITE profilePS5103222.4842986IPR001471AP2/ERF domain
PRINTSPR003672.7E-103041IPR001471AP2/ERF domain
PRINTSPR003672.7E-105268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MEGCKKSPLK PWKKGPTRGK GGPQNAACEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAALAYD EAARRLYGPE AYLNLPHMQP NFTTSKSQKF KWFPSRNFIS MFPSRGLLNL  120
NAQPSLHVIH QRLQQLRQNG VVAIHQSPDH SSSSTDPKVV QLDNLGCQNH AETLPPVQHD  180
HAQTSPQKTL GDSEEKPQID LLEFLQQMGI LKEERGSEKT ESTGSSTLSE AASRDDSEQP  240
GVFSDMSVNW EELIEMHDHG VADNFLASEG IQFEACDINE DLTFSSSIWN Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-183086360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24232
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-139AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229502.10.0dehydration-responsive element-binding protein 2F
TrEMBLA0A151SEL80.0A0A151SEL8_CAJCA; Dehydration-responsive element-binding protein 2F
STRINGXP_007145629.11e-170(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54773150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.15e-71ERF family protein