PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24780
Common NameKK1_026253
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 272aa    MW: 30333 Da    PI: 6.38
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24780genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.4e-21128178255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+++AeIrd s+  k +r++lg+f+taeeAa a+++a+++++g
  C.cajan_24780 128 HYRGVRRRP-WGKYAAEIRDSSN--KGARVWLGTFDTAEEAALAYDKAALRIRG 178
                    8********.**********543..35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.4E-32127187IPR001471AP2/ERF domain
CDDcd000182.81E-30127186No hitNo description
PROSITE profilePS5103223.92128186IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-24128188IPR016177DNA-binding domain
SMARTSM003805.0E-38128192IPR001471AP2/ERF domain
PfamPF008476.3E-15128178IPR001471AP2/ERF domain
PRINTSPR003672.5E-11129140IPR001471AP2/ERF domain
PRINTSPR003672.5E-11152168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MDIHSNHGAT SEGILENVWA KIMSSDRKDG RKGDAAESSN SWEELPSLDG REREGSMEIL  60
QRLPSLGRWI SMGADFWEEV LDGIIPPKAS NREDSSNNDL EIGRSATNQS NKVEEDGVMR  120
RDKRIAKHYR GVRRRPWGKY AAEIRDSSNK GARVWLGTFD TAEEAALAYD KAALRIRGPK  180
AYLNFPLEMV ASALGSCDHH KGNGLTCTCI GNKEKTIKKR GSREREAFND IMNEQSATKK  240
VAGLECMVEK ELGVFVFQDL GSDYLDSLLS SF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-28127189466ATERF1
3gcc_A2e-28127189466ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119135RRDKRIAKHYRGVRRRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24780
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029129841.10.0ethylene-responsive transcription factor ERF091
TrEMBLA0A151SAV40.0A0A151SAV4_CAJCA; Ethylene-responsive transcription factor ERF091 family
STRINGGLYMA13G30710.11e-151(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95473142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.14e-31ERF family protein