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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | C.cajan_24851 | ||||||||
| Common Name | KK1_024949 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family | bZIP | ||||||||
| Protein Properties | Length: 151aa MW: 17652.9 Da PI: 11.3505 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 31.6 | 3.5e-10 | 46 | 105 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ rr+++NRe+ArrsR RK+ +e+L++ + eN++L ++l+ ++ ++++e+
C.cajan_24851 46 ERKRRRMISNRESARRSRMRKQRHLENLRNQLSKCRVENRELSNRLQFVVHHCNRVRTEN 105
57889*****************************************99999999888887 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.20.5.170 | 4.1E-9 | 37 | 101 | No hit | No description |
| SMART | SM00338 | 1.9E-10 | 43 | 107 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 9.956 | 45 | 108 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 1.8E-7 | 45 | 105 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 8.84E-11 | 47 | 98 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 50 | 65 | IPR004827 | Basic-leucine zipper domain |
| CDD | cd14702 | 7.94E-13 | 52 | 99 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 151 aa Download sequence Send to blast |
MLSALPPLEN PFSPKALTSS SGSDEPNQSH EKSGPDPSEP ERRAEERKRR RMISNRESAR 60 RSRMRKQRHL ENLRNQLSKC RVENRELSNR LQFVVHHCNR VRTENEWLRS ERTLLHQKVS 120 NLTQILIFQQ LQPSFSSSPP SPWTCNTSLI T |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 46 | 50 | RKRRR |
| 2 | 59 | 66 | RRSRMRKQ |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | C.cajan_24851 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | KT031142 | 2e-76 | KT031142.1 Glycine max clone HN_CCL_140 BZIP transcription factor (Glyma17g17100.1) mRNA, partial cds. | |||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020229626.1 | 1e-104 | bZIP transcription factor 2 | ||||
| TrEMBL | A0A151SEB0 | 1e-103 | A0A151SEB0_CAJCA; G-box-binding factor 1 | ||||
| STRING | XP_004509055.1 | 4e-63 | (Cicer arietinum) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF5435 | 32 | 54 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G49760.1 | 2e-22 | basic leucine-zipper 5 | ||||




