PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24916
Common NameKK1_025588
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 192aa    MW: 22100.6 Da    PI: 10.3751
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24916genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.9e-091868654
                   HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS
            HLH  6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54
                   + +Er+RR +++s   +L +l+P++ k+++ K  +   + L +A +YIk++
  C.cajan_24916 18 KTIERNRRIQMKSLCLQLASLVPPNHKPSKSKlmVGQHDQLDLAARYIKHM 68
                   689*********************8555555534556678**********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.25E-61273No hitNo description
PROSITE profilePS5088810.1821268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-91387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-81692IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-41874IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-61868IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MKKRSATTNN DSSKLDRKTI ERNRRIQMKS LCLQLASLVP PNHKPSKSKL MVGQHDQLDL  60
AARYIKHMRE RIEKLKRQKE QAMSTKQSND RRTLNNNVDY KLPVLELRDL GSGIEVVLVS  120
GLNKTFMLYE VIRVLEEEGA EVVTASFSTV GNKIFYFVHA QVKISRVGVE TTRVYARLQE  180
FIAPLEIWAE DV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24916
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150353e-51AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230334.11e-141transcription factor bHLH162
TrEMBLA0A151SCH21e-140A0A151SCH2_CAJCA; Uncharacterized protein
STRINGXP_007138091.11e-112(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-27bHLH family protein