PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25264
Common NameKK1_025314
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 237aa    MW: 26627.1 Da    PI: 7.1984
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25264genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.4e-114789754
                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     Er+RR ++ s+f+ L+el+P++      K + a+++  A++YI++L
  C.cajan_25264 47 TTERQRRVDLSSKFDALKELIPNP-----SKSDRASVVGDAIDYIREL 89
                   57*********************9.....79***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.13E-1439114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-1140107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.2534089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-94695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-84889IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.94E-94993No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MPAPRNDFAF EGSGVGFHQD FGNEFTQDVS YVGKKRGGKR TKLFTSTTER QRRVDLSSKF  60
DALKELIPNP SKSDRASVVG DAIDYIRELL RTVNELKLLA EKKRHEKQRV MMMMRHRVET  120
EGESKLEAVG DPDDGSYSES LRSSWIQRKS KDTEVDVRIV DNEVTIKLVQ RKKVDCLVHV  180
SHALDELNLD LQHVAGGHIG DFCSYLFNTK ICEGSSVYAS AIANKVIEVM DASFAAA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25264
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-115AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229990.11e-176transcription factor bHLH91
SwissprotQ9LND02e-63BH089_ARATH; Transcription factor bHLH89
TrEMBLA0A151SDD51e-175A0A151SDD5_CAJCA; Transcription factor bHLH89
STRINGXP_007156379.11e-125(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14498811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.28e-66bHLH family protein
Publications ? help Back to Top
  1. Cui J, et al.
    Feedback Regulation of DYT1 by Interactions with Downstream bHLH Factors Promotes DYT1 Nuclear Localization and Anther Development.
    Plant Cell, 2016. 28(5): p. 1078-93
    [PMID:27113773]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]