PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25307
Common NameKK1_025357
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WOX
Protein Properties Length: 219aa    MW: 23723.2 Da    PI: 8.8706
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25307genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox246.4e-0813403457
                   HHHC....TS-HHHHHHHHHHHHHHHHC CS
       Homeobox 34 Akkl....gLterqVkvWFqNrRakekk 57
                    k l     + +++V++WFqNrR + ++
  C.cajan_25307 13 RKLLekfgTVGDANVFYWFQNRRSRSRR 40
                   444444467889*************997 PP
2Wus_type_Homeobox62.49.3e-211422465
  Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q
      C.cajan_25307  1 MVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQ 42
                       78**************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500718.697141IPR001356Homeobox domain
SuperFamilySSF466892.26E-7347IPR009057Homeodomain-like
PfamPF000461.7E-5940IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.0E-41745IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MVNPPKDETV RIRKLLEKFG TVGDANVFYW FQNRRSRSRR RQRQIQASLN QVGGASSNNN  60
NNNLYQHHHQ NNTPLVANMG FGGGANSSLP NSSYISGSSS SSFGGSSQES LSEFFSPSTQ  120
MGFPGIDHHA SSVSSSVLYP PEASNLNYHS GFGGIPSGFI TVFINGVATE VPRGPIDIKA  180
TFGEDVMLVH SSGVSVPTNE FGFLMQGLQH GESYFLVRT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25307
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150447e-68AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229993.11e-156WUSCHEL-related homeobox 11
SwissprotQ6X7J33e-50WOX11_ARATH; WUSCHEL-related homeobox 11
TrEMBLA0A151SDB51e-157A0A151SDB5_CAJCA; WUSCHEL-related homeobox 11
STRINGXP_007151517.11e-101(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58983152
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03660.12e-45WUSCHEL related homeobox 11
Publications ? help Back to Top
  1. Hu X,Xu L
    Transcription Factors WOX11/12 Directly Activate WOX5/7 to Promote Root Primordia Initiation and Organogenesis.
    Plant Physiol., 2016. 172(4): p. 2363-2373
    [PMID:27784768]
  2. Sheng L, et al.
    Non-canonical WOX11-mediated root branching contributes to plasticity in Arabidopsis root system architecture.
    Development, 2017. 144(17): p. 3126-3133
    [PMID:28743799]
  3. Liu J, et al.
    The WOX11-LBD16 Pathway Promotes Pluripotency Acquisition in Callus Cells During De Novo Shoot Regeneration in Tissue Culture.
    Plant Cell Physiol., 2018. 59(4): p. 734-743
    [PMID:29361138]
  4. Baesso B, et al.
    Transcription factors PRE3 and WOX11 are involved in the formation of new lateral roots from secondary growth taproot in A. thaliana.
    Plant Biol (Stuttg), 2018. 20(3): p. 426-432
    [PMID:29450949]